Good question and the answer is yes, I have and I do.
My DW kit is configured as a 4-piece at the moment and the rack and floor toms are a 5th apart which just happens to work really well for a two tom configuration. The batter and resonant heads are a also 5th apart and the drums sound fantastic like that.
My Renowns, on the other hand, are configured as a 5-piece and the toms are a 4th apart. Coincidentally, the heads are also a 4th apart but that's a relatively new thing for me as I generally tune heads a 5th apart regardless of the intervals between toms. In this case I wanted to try something different and used 4ths. I'm glad I did because the kit sounds better than ever, and that is saying a lot.