Congrates on the Yamahas!! I have the Recording Custom model from Yamaha that has the same tom mount configuration of the bass drum as yours does. The Royal blue is a great color and your right you do need some tuning there hahahaha!!!
Ok heres a tip on tuning and it is the old way to tune a drum first, then you make small adjustments after. OK???
Take your first tom off the mount, hold it up pretty close to your ear and knock on the middle part of the drum shell. Knock a few times slowly and get that tone in your ear, take your drum key and get working on getting that same tone from the knock coming out of your shell. It will take some time you need to get both heads tunes the same and reproduce the shell knocking sound. This is the correct way to tune a drum shell, your reproducing the sound of the shell through the heads. Take your time from the sound of your toms on your video you probably need to detune a little then start. Do this with each drum when you get to the floor tom if you have no one to help you (hold the drum freely) you can put it on a table but the right way is to have freely suspended. Now when you get to the bass drum your gonna get the batter head down to were you have good action remaining on your beater for it to have good "come back"! For the front head (reso) get someone to sit behind the kit and step on the pedal with a consistent strike with atleast 3 to 4 seconds inbetween hits. Get your front head fairly tight and starting from your top left rod (tention rod) as soon as the strike hits lower the tension and listen to the note drop in tone. You will need to lower most of them but theres ALWAYS a SWEET spot on every bass drum (thats one or two lugs that make a huge difference in tone) those two are your main tone controls. Their all most always the bottom left one or two up depending if its an 8 or 10 lug kick. The other control lug is usually the rightside (facing the drum tuning) half way up. I find that my top lugs are fairly tight and they loosen as I go down sorta like getting more bottom from the bottom of the drum, get it? This way of tuning comes in handy when drummers get a loud snare drum snare reverberation when hitting the rack toms. Either the snare isn't set up correctly or the toms aren't tuned right. Try this Chris and see if you get results, I've been using this method for 50 years now and if I listened to the teachers I had back then I'd be a great drummer instead of a great tuner hahahaha!!!! Good luck son! Doc